Research interests

ai_1 Artificial Intelligence and Pattern Recognition
Knowledge representation, machine learning, clustering, classification, feature Selection
scientif Robotics
Perception, control, learning, aerial robots, bio-inspired robots, household robots
compbio BioInformatics
Sequence analysis, Algorithms for Bioinformatics, cDNA Microarray Data Analysis
graphics Graphics
Interactive rendering, global illumination, measurement, simulation, sound, perceptions
matrix Scientific Computing
Numerical analysis, computational geometry, physically based animation
neuro_sc Neuroscience
Neuroimaging

Software

MVDA STRAIN SWP

Publications

2020
  • Dimension Reduction Techniques in a Brain–Computer Interface Application
    Cozza, Federico and Galdi, Paola and Serra, Angela and Pasqua, Gabriele and Pavone, Luigi and Tagliaferri, Roberto
    Springer, Singapore. p. 107--118. 2020
    [bibtex]

    • 2019
  • Strong–Weak Pruning for Brain Network Identification in Connectome-Wide Neuroimaging: Application to Amyotrophic Lateral Sclerosis Disease Stage Characterization
    Serra, Angela and Galdi, Paola and Pesce, Emanuele and Fratello, Michele and Trojsi, Francesca and Tedeschi, Gioacchino and Tagliaferri, Roberto and Esposito, Fabrizio
    p. 1950007. 2019
    [bibtex]

  • INSIdE NANO: a systems biology framework to contextualize the mechanism-of-action of engineered nanomaterials
    Serra, Angela and Letunic, Ivica and Fortino, Vittorio and Handy, Richard D. and Fadeel, Bengt and Tagliaferri, Roberto and Greco, Dario
    Nature Publishing Group. p. 179. 2019
    [bibtex]

  • Hierarchical block matrix approach for multi-view clustering
    Serra, Angela and Guida, Maria Domenica and Li\'{o}, Pietro and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Cham. p. 200--212. 2019
    [bibtex]

  • Multi-parametric and multi-regional histogram analysis of MRI: modality integration reveals imaging phenotypes of glioblastoma
    Li, Chao and Wang, Shuo and Serra, Angela and Torheim, Turid and Yan, Jiun Lin and Boonzaier, Natalie R. and Huang, Yuan and Matys, Tomasz and McLean, Mary A. and Markowetz, Florian and Price, Stephen J.
    Springer Berlin Heidelberg. p. 4718--4729. 2019
    [bibtex]

  • A deep learning approach for road damage classification
    Ciaparrone, Gioele and Serra, Angela and Covito, Vito and Finelli, Paolo and Scarpato, Carlo Alberto and Tagliaferri, Roberto
    Lecture Notes in Electrical Engineering Springer, Singapore. p. 655--661. 2019
    [bibtex]

  • Stochastic Rank Aggregation for the Identification of Functional Neuromarkers
    Galdi, Paola and Fratello, Michele and Trojsi, Francesca and Russo, Antonio and Tedeschi, Gioacchino and Tagliaferri, Roberto and Esposito, Fabrizio
    Springer US. p. 1--18. 2019
    [bibtex]

    • 2018
  • A distributed brain network predicts general intelligence from resting-state human neuroimaging data
    Dubois, Julien and Galdi, Paola and Paul, Lynn K. and Adolphs, Ralph
    p. 20170284. 2018
    [bibtex]

  • Resting-state functional brain connectivity best predicts the personality dimension of openness to experience.
    Dubois, Julien and Galdi, Paola and Han, Yanting and Paul, Lynn K and Adolphs, Ralph
    Personality Neuroscience. 2018
    [bibtex]

  • Machine learning for bioinformatics and neuroimaging
    Serra, Angela and Galdi, Paola and Tagliaferri, Roberto
    John Wiley \& Sons, Ltd. p. e1248. 2018
    [bibtex]

  • A study on multi-omic oscillations in Escherichia coli metabolic networks
    Bardozzo, Francesco and Li\'{o}, Pietro and Tagliaferri, Roberto
    BioMed Central. p. 194. 2018
    [bibtex]

  • Consensus-based feature extraction in rs-fMRI data analysis
    Galdi, Paola and Fratello, Michele and Trojsi, Francesca and Russo, Antonio and Tedeschi, Gioacchino and Tagliaferri, Roberto and Esposito, Fabrizio
    Springer Berlin Heidelberg. p. 3785--3795. 2018
    [bibtex]

  • INfORM: Inference of NetwOrk Response Modules
    Marwah, Veer Singh and Kinaret, Pia Anneli Sofia and Serra, Angela and Scala, Giovanni and Lauerma, Antti and Fortino, Vittorio and Greco, Dario
    Narnia. p. 2136--2138. 2018
    [bibtex]

  • Robust clustering of noisy high-dimensional gene expression data for patients subtyping
    Coretto, Pietro and Serra, Angela and Tagliaferri, Roberto
    Narnia. p. 4064--4072. 2018
    [bibtex]

  • Robust and sparse correlation matrix estimation for the analysis of high-dimensional genomics data
    Serra, Angela and Coretto, Pietro and Fratello, Michele and Tagliaferri, Roberto
    Narnia. p. 625--634. 2018
    [bibtex]

    • 2017
  • Rotation clustering: A consensus clustering approach to cluster gene expression data
    Galdi, Paola and Serra, Angela and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Cham. p. 229--238. 2017
    [bibtex]

    • 2016
  • Data integration in genomics and systems biology
    Serra, Angela and Fratello, Michele and Greco, Dario and Tagliaferri, Roberto
    2016 IEEE Congress on Evolutionary Computation, CEC 2016 IEEE. p. 1272--1279. 2016
    [bibtex]

  • Effectiveness of projection techniques in genomic data analysis
    Galdi, Paola and Serra, Angela and Greco, Dario and Tagliaferri, Roberto
    2016 IEEE 2nd International Forum on Research and Technologies for Society and Industry Leveraging a Better Tomorrow, RTSI 2016 IEEE. p. 1--6. 2016
    [bibtex]

  • CONDOP: An R package for CONdition-Dependent Operon Predictions
    Fortino, Vittorio and Tagliaferri, Roberto and Greco, Dario
    Narnia. p. 3199--3200. 2016
    [bibtex]

    • 2015
  • A multi-view genomic data simulator
    Fratello, Michele and Serra, Angela and Fortino, Vittorio and Raiconi, Giancarlo and Tagliaferri, Roberto and Greco, Dario
    BioMed Central. p. 151. 2015
    [bibtex]

  • MVDA: A multi-view genomic data integration methodology
    Serra, Angela and Fratello, Michele and Fortino, Vittorio and Raiconi, Giancarlo and Tagliaferri, Roberto and Greco, Dario
    BioMed Central. p. 261. 2015
    [bibtex]

  • Consensus clustering in gene expression
    Galdi, Paola and Napolitano, Francesco and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Cham. p. 57--67. 2015
    [bibtex]

  • Multi omic oscillations in bacterial pathways
    Bardozzo, Francesco and Li\'{o}, Pietro and Tagliaferri, Roberto
    Proceedings of the International Joint Conference on Neural Networks IEEE. p. 1--8. 2015
    [bibtex]

  • Impact of different metrics on multi-view clustering
    Serra, Angela and Greco, Dario and Tagliaferri, Roberto
    Proceedings of the International Joint Conference on Neural Networks IEEE. p. 1--8. 2015
    [bibtex]

    • 2014
  • Transcriptome dynamics-based operon prediction in prokaryotes
    Fortino, Vittorio and Smolander, Olli Pekka and Auvinen, Petri and Tagliaferri, Roberto and Greco, Dario
    BioMed Central. p. 145. 2014
    [bibtex]

  • SASCr3: A real time hardware coprocessor for stereo correspondence
    Puglia, Luca and Vigliar, Mario and Raiconi, Giancarlo
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Cham. p. 383--391. 2014
    [bibtex]

    • 2013
  • Bioinformatic pipelines in Python with Leaf
    Napolitano, Francesco and Mariani-Costantini, Renato and Tagliaferri, Roberto
    BioMed Central. p. 201. 2013
    [bibtex]

    • 2012
  • Supporting the design, communication and management of bioinformatic protocols through the leaf tool
    Napolitano, Francesco and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Berlin, Heidelberg. p. 226--237. 2012
    [bibtex]

    • 2011
  • Advances in Computational Intelligence and Bioinformatics
    Masulli, Francesco and Tagliaferri, Roberto
    Springer-Verlag. p. 1457--1458. 2011
    [bibtex]

    • 2010
  • Discovering hidden structures in high dimensional data space
    Murino, Loredana
    Universita degli studi di Salerno. 2010
    [bibtex]

  • Multiple clustering solutions analysis through least-squares consensus algorithms
    Murino, Loredana and Angelini, Claudia and Bifulco, Ida and De Feis, Italia and Raiconi, Giancarlo and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Berlin, Heidelberg. p. 215--227. 2010
    [bibtex]

    • 2009
  • Identifying network of drug mode of action by gene expression profiling
    Iorio, Francesco and Tagliaferri, Roberto and Di Bernardo, Diego
    Mary Ann Liebert, Inc. 2 Madison Avenue Larchmont, NY 10538 USA . p. 241--251. 2009
    [bibtex]

  • New Directions in Neural Networks
    Bruno Apolloni and Simone Bassis and Maria Marinaro
    18th Italian Workshop on Neural Networks: WIRN 2008 IOS Press. p. 244--277. 2009
    [bibtex]

  • Computer algebra software for least squares and total least norm inversion of geophysical models
    Bifulco, I. and Raiconi, G. and Scarpa, R.
    Pergamon. p. 1427--1438. 2009
    [bibtex]

  • Building maps of drugs mode-of-action from gene expression data
    Iorio, Francesco and Tagliaferri, Roberto and Di Bernardo, Diego
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Berlin, Heidelberg. p. 56--65. 2009
    [bibtex]

  • Metaclustering and consensus algorithms for interactive data analysis and validation
    Bifulco, Ida and Fedullo, Carmine and Napolitano, Francesco and Raiconi, Giancarlo and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer, Berlin, Heidelberg. p. 163--170. 2009
    [bibtex]

    • 2008
  • Robust clustering by aggregation and intersection methods
    Bifulco, Ida and Fedullo, Carmine and Napolitano, Francesco and Raiconi, Giancarlo and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer Berlin Heidelberg. p. 732--739. 2008
    [bibtex]

  • Using global optimization to explore multiple solutions of clustering problems
    Bifulco, Ida and Murino, Loredana and Napolitano, Francesco and Raiconi, Giancarlo and Tagliaferri, Roberto
    Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics) Springer Berlin Heidelberg. p. 724--731. 2008
    [bibtex]